tests/testthat/_snaps/repo-status.md

In r-lib/pkgcache: Cache 'CRAN'-Like Metadata and R Packages

repo_status

Code
  print(cf)
Output
  [[1]]
  [1] "source"

  [[2]]
  [1] "4.2.1"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 1 x 10
    name  url                     type  bioc_version platform path        r_version ok     ping error 
    <chr> <chr>                   <chr> <chr>        <chr>    <chr>       <chr>     <lgl> <dbl> <list>
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source   src/contrib 4.2       TRUE    0.1 <NULL>
Code
  summary(stat)
Output
  Repository summary:      source          
  CRAN @ 127.0.0.1:3000     OK     (100ms)

Code
  print(cf)
Output
  [[1]]
  [1] "aarch64-apple-darwin20" "source"

  [[2]]
  [1] "4.2.1"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 2 x 10
    name  url                     type  bioc_version platform               path                                 r_version ok     ping error     
    <chr> <chr>                   <chr> <chr>        <chr>                  <chr>                                <chr>     <lgl> <dbl> <list>    
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                 src/contrib                          4.2       TRUE    0.1 <NULL>    
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         aarch64-apple-darwin20 bin/macosx/big-sur-arm64/contrib/4.2 4.2       FALSE  NA   <async_rj>
Code
  summary(stat)
Output
  Repository summary:      source aarch64-apple-darwin20       
  CRAN @ 127.0.0.1:3000     OK             --

Code
  print(cf)
Output
  [[1]]
  [1] "aarch64-apple-darwin20" "source"

  [[2]]
  [1] "4.1.2" "4.2.1"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 4 x 10
    name  url                     type  bioc_version platform               path                                 r_version ok     ping error     
    <chr> <chr>                   <chr> <chr>        <chr>                  <chr>                                <chr>     <lgl> <dbl> <list>    
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                 src/contrib                          4.1       TRUE    0.1 <NULL>    
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                 src/contrib                          4.2       TRUE    0.1 <NULL>    
  3 CRAN  http://127.0.0.1:3000/ cran  <NA>         aarch64-apple-darwin20 bin/macosx/big-sur-arm64/contrib/4.1 4.1       FALSE  NA   <async_rj>
  4 CRAN  http://127.0.0.1:3000/ cran  <NA>         aarch64-apple-darwin20 bin/macosx/big-sur-arm64/contrib/4.2 4.2       FALSE  NA   <async_rj>
Code
  summary(stat)
Output
  Repository summary:              source aarch64-apple-darwin20       
  CRAN @ 127.0.0.1:3000 (R 4.1)     OK             --               
  CRAN @ 127.0.0.1:3000 (R 4.2)     OK             --

Code
  print(cf)
Output
  [[1]]
  [1] "x86_64-apple-darwin17.0" "source"

  [[2]]
  [1] "4.2.1"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 2 x 10
    name  url                     type  bioc_version platform                path                   r_version ok     ping error     
    <chr> <chr>                   <chr> <chr>        <chr>                   <chr>                  <chr>     <lgl> <dbl> <list>    
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                  src/contrib            4.2       TRUE    0.1 <NULL>    
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         x86_64-apple-darwin17.0 bin/macosx/contrib/4.2 4.2       FALSE  NA   <async_rj>
Code
  summary(stat)
Output
  Repository summary:      source x86_64-apple-darwin17.0       
  CRAN @ 127.0.0.1:3000     OK             --

Code
  print(cf)
Output
  [[1]]
  [1] "windows" "source"

  [[2]]
  [1] "4.2.1"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 2 x 10
    name  url                     type  bioc_version platform                path                    r_version ok     ping error     
    <chr> <chr>                   <chr> <chr>        <chr>                   <chr>                   <chr>     <lgl> <dbl> <list>    
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                  src/contrib             4.2       TRUE    0.1 <NULL>    
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         i386+x86_64-w64-mingw32 bin/windows/contrib/4.2 4.2       FALSE  NA   <async_rj>
Code
  summary(stat)
Output
  Repository summary:      source i386+x86_64-w64-mingw32       
  CRAN @ 127.0.0.1:3000     OK             --

Code
  print(cf)
Output
  [[1]]
  [1] "windows" "source"

  [[2]]
  [1] "4.0.5"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 2 x 10
    name  url                     type  bioc_version platform                path                    r_version ok     ping error     
    <chr> <chr>                   <chr> <chr>        <chr>                   <chr>                   <chr>     <lgl> <dbl> <list>    
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                  src/contrib             4.0       TRUE    0.1 <NULL>    
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         i386+x86_64-w64-mingw32 bin/windows/contrib/4.0 4.0       FALSE  NA   <async_rj>
Code
  summary(stat)
Output
  Repository summary:      source i386+x86_64-w64-mingw32       
  CRAN @ 127.0.0.1:3000     OK             --

Code
  print(cf)
Output
  [[1]]
  [1] "windows" "source"

  [[2]]
  [1] "3.6.3"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 2 x 10
    name  url                     type  bioc_version platform                path                    r_version ok     ping error     
    <chr> <chr>                   <chr> <chr>        <chr>                   <chr>                   <chr>     <lgl> <dbl> <list>    
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                  src/contrib             3.6       TRUE    0.1 <NULL>    
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         i386+x86_64-w64-mingw32 bin/windows/contrib/3.6 3.6       FALSE  NA   <async_rj>
Code
  summary(stat)
Output
  Repository summary:      source i386+x86_64-w64-mingw32       
  CRAN @ 127.0.0.1:3000     OK             --

Code
  print(cf)
Output
  [[1]]
  [1] "windows" "source"

  [[2]]
  [1] "3.5.3"

Code
  stat <- repo_status(bioc = FALSE, platforms = cf[[1]], r_version = cf[[2]])
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 2 x 10
    name  url                     type  bioc_version platform                path                    r_version ok     ping error     
    <chr> <chr>                   <chr> <chr>        <chr>                   <chr>                   <chr>     <lgl> <dbl> <list>    
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                  src/contrib             3.5       TRUE    0.1 <NULL>    
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         i386+x86_64-w64-mingw32 bin/windows/contrib/3.5 3.5       FALSE  NA   <async_rj>
Code
  summary(stat)
Output
  Repository summary:      source i386+x86_64-w64-mingw32       
  CRAN @ 127.0.0.1:3000     OK             --

bioc repo status

Code
  stat <- repo_status(bioc = TRUE, platforms = "source", r_version = "4.2")
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 6 x 10
    name          url                                                   type  bioc_version platform path        r_version ok     ping error 
    <chr>         <chr>                                                 <chr> <chr>        <chr>    <chr>       <chr>     <lgl> <dbl> <list>
  1 CRAN          http://127.0.0.1:3000/                               cran  <NA>         source   src/contrib 4.2       TRUE    0.1 <NULL>
  2 BioCsoft      http://127.0.0.1:3000//packages/3.16/bioc            bioc  3.16         source   src/contrib 4.2       TRUE    0.1 <NULL>
  3 BioCann       http://127.0.0.1:3000//packages/3.16/data/annotation bioc  3.16         source   src/contrib 4.2       TRUE    0.1 <NULL>
  4 BioCexp       http://127.0.0.1:3000//packages/3.16/data/experiment bioc  3.16         source   src/contrib 4.2       TRUE    0.1 <NULL>
  5 BioCworkflows http://127.0.0.1:3000//packages/3.16/workflows       bioc  3.16         source   src/contrib 4.2       TRUE    0.1 <NULL>
  6 BioCbooks     http://127.0.0.1:3000//packages/3.16/books           bioc  3.16         source   src/contrib 4.2       TRUE    0.1 <NULL>
Code
  summary(stat)
Output
  Repository summary:               source          
  CRAN          @ 127.0.0.1:3000     OK     (100ms)
  BioCsoft      @ 127.0.0.1:3000     OK     (100ms)
  BioCann       @ 127.0.0.1:3000     OK     (100ms)
  BioCexp       @ 127.0.0.1:3000     OK     (100ms)
  BioCworkflows @ 127.0.0.1:3000     OK     (100ms)
  BioCbooks     @ 127.0.0.1:3000     OK     (100ms)

repo with binary packages

Code
  stat <- repo_status(platforms = platforms, r_version = "4.2", bioc = FALSE)
  stat$ping[stat$ok] <- 0.1
  stat
Output
  # A data frame: 2 x 10
    name  url                     type  bioc_version platform               path                                 r_version ok     ping error 
    <chr> <chr>                   <chr> <chr>        <chr>                  <chr>                                <chr>     <lgl> <dbl> <list>
  1 CRAN  http://127.0.0.1:3000/ cran  <NA>         source                 src/contrib                          4.2       TRUE    0.1 <NULL>
  2 CRAN  http://127.0.0.1:3000/ cran  <NA>         aarch64-apple-darwin20 bin/macosx/big-sur-arm64/contrib/4.2 4.2       TRUE    0.1 <NULL>
Code
  summary(stat)
Output
  Repository summary:      source aarch64-apple-darwin20          
  CRAN @ 127.0.0.1:3000     OK             OK             (100ms)

repo_status unicode output [fancy]

Code
  stat <- repo_status(bioc = FALSE, platforms = "source")
  stat$ping[stat$ok] <- 0.1
  summary(stat)
Output
  Repository summary:      source[36m          [39m
  CRAN @ 127.0.0.1:3000   [32m  ✔   [39m[36m   (100ms)[39m

convert repo_status summary to data frame

Code
  stat <- repo_status(bioc = FALSE, platforms = "source")
  stat$ping[stat$ok] <- 0.1
  summary(stat)[]
Output
  # A data frame: 1 x 3
    repository             source  ping
    <chr>                  <lgl>  <dbl>
  1 CRAN @ 127.0.0.1:3000 TRUE     0.1

r-lib/pkgcache documentation built on April 7, 2024, 5:57 a.m.