revdep/failures.md

In r-lib/zeallot: Multiple, Unpacking, and Destructuring Assignment

COTAN

• Version: 2.8.1
• GitHub: https://github.com/seriph78/COTAN
• Source code: https://github.com/cran/COTAN
• Date/Publication: 2025-04-30
• Number of recursive dependencies: 269

Run revdepcheck::revdep_details(, "COTAN") for more info

In both

• R CMD check timed out

• checking dependencies in R code ... NOTE 'library' or 'require' call to ‘torch’ in package code. Please use :: or requireNamespace() instead. See section 'Suggested packages' in the 'Writing R Extensions' manual. Unexported object imported by a ':::' call: ‘ggplot2:::ggname’ See the note in ?`:::` about the use of this operator.

• checking R code for possible problems ... NOTE mergeUniformCellsClusters : fromMergedName: warning in vapply(currentClNames, function(clName, mergedName) {: partial argument match of 'FUN.VAL' to 'FUN.VALUE' mergeUniformCellsClusters : fromMergedName: warning in return(str_detect(mergedName, clName)): partial argument match of 'FUN.VAL' to 'FUN.VALUE' mergeUniformCellsClusters : fromMergedName: warning in }, FUN.VAL = logical(1L), mergedClName): partial argument match of 'FUN.VAL' to 'FUN.VALUE' GDIPlot: no visible binding for global variable ‘sum.raw.norm’ ... heatmapPlot: no visible binding for global variable ‘coex’ mitochondrialPercentagePlot: no visible binding for global variable ‘mit.percentage’ scatterPlot: no visible binding for global variable ‘.x’ screePlot: no visible binding for global variable ‘PC’ screePlot: no visible binding for global variable ‘Variance’ Undefined global functions or variables: .x CellNumber Cluster Condition ExpGenes GDI PC PC1 PC2 Variance coex g2 group keys means mit.percentage n nu obj sum.raw.norm type types values violinwidth width x xmax xmaxv xminv y

tfevents

• Version: 0.0.4
• GitHub: https://github.com/mlverse/tfevents
• Source code: https://github.com/cran/tfevents
• Date/Publication: 2024-06-27 12:40:02 UTC
• Number of recursive dependencies: 83

Run revdepcheck::revdep_details(, "tfevents") for more info

In both

• checking whether package ‘tfevents’ can be installed ... ERROR Installation failed. See ‘/Users/nteetor/haufinch/projects/zeallot/revdep/checks.noindex/tfevents/new/tfevents.Rcheck/00install.out’ for details.

Installation

Devel

* installing *source* package ‘tfevents’ ...
** this is package ‘tfevents’ version ‘0.0.4’
** package ‘tfevents’ successfully unpacked and MD5 sums checked
** using staged installation
Homebrew 4.4.3
Using PKG_CFLAGS=-I/opt/homebrew/include
Using PKG_LIBS=-L/opt/homebrew/lib -lprotobuf
Using C++17 compiler: clang++ -arch arm64 -std=gnu++17
------------------------------[ ANTICONF ]-----------------------------
Configuration failed to find protobuf. Try installing:
...
is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
----------------------------[ ERROR MESSAGE ]----------------------------
<stdin>:1:10: fatal error: 'google/protobuf/message.h' file not found
    1 | #include <google/protobuf/message.h>
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
1 error generated.
------------------------------------------------------------------------
ERROR: configuration failed for package ‘tfevents’
* removing ‘/Users/nteetor/haufinch/projects/zeallot/revdep/checks.noindex/tfevents/new/tfevents.Rcheck/tfevents’

CRAN

* installing *source* package ‘tfevents’ ...
** this is package ‘tfevents’ version ‘0.0.4’
** package ‘tfevents’ successfully unpacked and MD5 sums checked
** using staged installation
Homebrew 4.4.3
Using PKG_CFLAGS=-I/opt/homebrew/include
Using PKG_LIBS=-L/opt/homebrew/lib -lprotobuf
Using C++17 compiler: clang++ -arch arm64 -std=gnu++17
------------------------------[ ANTICONF ]-----------------------------
Configuration failed to find protobuf. Try installing:
...
is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
----------------------------[ ERROR MESSAGE ]----------------------------
<stdin>:1:10: fatal error: 'google/protobuf/message.h' file not found
    1 | #include <google/protobuf/message.h>
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
1 error generated.
------------------------------------------------------------------------
ERROR: configuration failed for package ‘tfevents’
* removing ‘/Users/nteetor/haufinch/projects/zeallot/revdep/checks.noindex/tfevents/old/tfevents.Rcheck/tfevents’

r-lib/zeallot documentation built on June 12, 2025, 9:40 p.m.