Pipeline.SpeciesTreeDistances.ScaleSingleBranch: Pipeline.SpeciesTreeDistances.ScaleSingleBranch: function to...

In radamsRHA/PSTDistanceR: Computing probabilistic distances between species tree models

Description

This function returns a matrix containing the 5 distance metics (3 probabilistic + Robinson-Foulds + BHV) across a range of scaler values

Usage

Pipeline.SpeciesTreeDistances.ScaleSingleBranch(vector.ScaleFactor,
  string.PathParentDir, string.PathHybridCoal, handle.SpeciesTree.Model1,
  handle.SpeciesTree.Model2, numeric.BranchToScale)

Arguments

vector.ScaleFactor	Vector to containing the values to scale the branches of the second species tree model
string.PathParentDir	Path to a parent directory that will be used for subdirectories
string.PathHybridCoal	Path to HYBRID-COAL executable
handle.SpeciesTree.Model1	Species Tree Model 1
handle.SpeciesTree.Model2	Species Tree Model 2
numeric.BranchToScale	Number indicating the branch to scale on species tree model 2

Value

XXX

radamsRHA/PSTDistanceR documentation built on March 4, 2020, 11:03 a.m.