API for rafalab/smallcount
Methods for Small Counts Stored in a Sparse Matrix
| Global functions | |
|---|---|
| .calculateMu | Man page Source code |
| .colsumsWithDefault | Man page Source code |
| .computePca | Man page Source code |
| .convertToSparse | Man page Source code |
| .getCountTransform | Source code |
| .getDuplicatedArgument | Source code |
| .nzcols | Man page Source code |
| .nzrows | Man page Source code |
| .poissonDevianceResidualsPca | Man page Source code |
| .poissonPearsonResidualsPca | Man page Source code |
| .rawResidualsPca | Man page Source code |
| .rowRatesWithDefault | Man page Source code |
| .safeDivide | Source code |
| CountTransform | Man page Source code |
| CountTransform-class | Man page |
| TransformedMatrix | Man page Source code |
| TransformedMatrix-class | Man page |
| cpm_log1p_transform | Man page Source code |
| cppPoissonDevianceTransformation | Source code |
| cppPoissonDispersionTransformation | Source code |
| cppReadSparseMatrix | Source code |
| generate_temp_dir | Source code |
| groupRates | Man page Source code |
| identity_transform | Man page Source code |
| log1p_transform | Man page Source code |
| poissonDeviance | Man page Source code |
| poissonDispersion | Man page Source code |
| poissonPca | Man page Source code |
| readSparseMatrix | Man page Source code |
| scaled_log1p_transform | Man page Source code |
| standardize_directory_name | Source code |
| tenx_subset | Man page |
| unzip_file | Man page Source code |
| unzip_helper | Source code |
| validate_sample | Man page Source code |
| validate_tenx_directory | Source code |
