README.md
In ramellose/CoNetinR: CoNet implementation in R
New implementation!
CoNetinR is being implementend fully in the seqgroup package. Please check out the barebones implementation here. The seqgroup implementation will receive more updates and improvements in the future.
CoNetinR
The CoNetinR package provides an R implementation of CoNet. Note that this implementation has less functions than the Cytoscape implementation; for example, p-value merging and ensemble edge calculation is not available. For more information on the original implementation, go here.
Installation
To install the development version in R, use
library(devtools)
install_github("ramellose/CoNetinR")
library(CoNetinR)
Tutorials
For a tour of CoNetinR, see the overview vignette.
Acknowledgements
Kindly cite this work as follows: Faust, K., & Raes, J. (2016). CoNet app: inference of biological association networks using Cytoscape. F1000Research, 5.
ramellose/CoNetinR documentation built on Oct. 16, 2019, 9:50 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
New implementation!
CoNetinR is being implementend fully in the seqgroup package. Please check out the barebones implementation here. The seqgroup implementation will receive more updates and improvements in the future.
CoNetinR
The CoNetinR package provides an R implementation of CoNet. Note that this implementation has less functions than the Cytoscape implementation; for example, p-value merging and ensemble edge calculation is not available. For more information on the original implementation, go here.
Installation
To install the development version in R, use
library(devtools)
install_github("ramellose/CoNetinR")
library(CoNetinR)
Tutorials
For a tour of CoNetinR, see the overview vignette.
Acknowledgements
Kindly cite this work as follows: Faust, K., & Raes, J. (2016). CoNet app: inference of biological association networks using Cytoscape. F1000Research, 5.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.