gc_examples: gwasrapidd entities' examples

In ramiromagno/gwasrapidd: 'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog

gwasrapidd entities' examples

Description

These are examples of GWAS Catalog entities shipped with gwasrapidd:

Usage

studies_ex01

studies_ex02

associations_ex01

associations_ex02

variants_ex01

variants_ex02

traits_ex01

traits_ex02

Format

studies_ex01

An S4 studies object of 2 studies: 'GCST001585' and 'GCST003985'.

studies_ex02

An S4 studies object of 2 studies: 'GCST001585' and 'GCST006655'.

associations_ex01

An S4 associations object of 4 associations: '22509', '22505', '19537565' and '19537593'.

associations_ex02

An S4 associations object of 3 associations: '19537593', '31665940' and '34944736'.

variants_ex01

An S4 variants object of 3 variants: 'rs146992477', 'rs56261590' and 'rs4725504'.

variants_ex02

An S4 variants object of 4 variants: 'rs56261590', 'rs4725504', 'rs11099757' and 'rs16871509'.

traits_ex01

An S4 traits object of 3 traits: 'EFO_0004884', 'EFO_0004343' and 'EFO_0005299'.

traits_ex02

An S4 traits object of 4 traits: 'EFO_0007845', 'EFO_0004699', 'EFO_0004884' and 'EFO_0004875'.

An object of class studies of length 1.

An object of class associations of length 1.

An object of class associations of length 1.

An object of class variants of length 1.

An object of class variants of length 1.

An object of class traits of length 1.

An object of class traits of length 1.

ramiromagno/gwasrapidd documentation built on Jan. 3, 2024, 10:21 p.m.