am_search_exact: Exact search for taxonomic names

In raquamaps/aquamapsdata: Curated Data From AquaMaps.Org

Description

Search taxonomic names with or without parameters specified.

• If parameters are given, the intersection of matching records are returned.

• If no parameters are given, all records are returned.

• If parameters are specified with NULL specified, examples of valid combinations of values are returned.

Usage

am_search_exact(
  SpeciesID = NULL,
  SpecCode = NULL,
  Genus = NULL,
  Species = NULL,
  FBname = NULL,
  OccurRecs = NULL,
  OccurCells = NULL,
  StockDefs = NULL,
  Kingdom = NULL,
  Phylum = NULL,
  Class = NULL,
  Order = NULL,
  Family = NULL,
  deepwater = NULL,
  angling = NULL,
  diving = NULL,
  dangerous = NULL,
  m_invertebrates = NULL,
  highseas = NULL,
  invasive = NULL,
  resilience = NULL,
  iucn_id = NULL,
  iucn_code = NULL,
  iucn_version = NULL,
  provider = NULL
)

Arguments

SpeciesID	AquaMaps unique identifier for a valid species used by the Catalogue of Life Annual Checklist (www.catalogueoflife.org). Example for the whale shark: Fis-30583
SpecCode	Species identifier used in FishBase or SeaLifeBase
Genus	Genus name of the species
Species	Specific epithet of the species
FBname	Common name suggested by FishBase or SeaLifeBase
OccurRecs	Number of point records used to generate good cells
OccurCells	Number of good cells used to generate species envelope
StockDefs	Distribution of the species as recorded in FishBase or SeaLifeBase
Kingdom	Kingdom to which the species belongs
Phylum	Phylum to which the species belongs
Class	Class to which the species belongs
Order	Order to which the species belongs
Family	Family to which the species belongs
deepwater	Does the species occur in the deep-sea (i.e. tagged bathypelagic or bathydemersal in FishBase or SeaLifeBase)? 0=No, 1=Yes
angling	Is the species a sport fish (i.e. tagged as a GameFish in FishBase)? 0=No, 1=Yes
diving	Is the species found on a dive (i.e. where DepthPrefMin in HSPEN < 20 meters)? 0=No, 1=Yes
dangerous	Is the species dangerous (i.e. tagged as traumatogenic or venonous in FishBase or SeaLifeBase)? 0=No, 1=Yes
m_invertebrates	Is the species a marine invertebrate? 0=No, 1=Yes
highseas	Is the species an open ocean fish species (i.e. tagged as pelagic-oceanic in FishBase)? 0=No, 1=Yes
invasive	Is the species recorded to be invasive (i.e. in FishBase or SeaLifeBase)? 0=No, 1=Yes
resilience	Resilience of the species (i.e. as recorded in FishBase/SeaLifeBase)
iucn_id	IUCN species identifier
iucn_code	IUCN Red list classification assigned to the species
iucn_version	IUCN version
provider	FishBase (FB) or SeaLifeBase (SLB)?

Value

tibble with results...

See Also

Other general: %>%(), am_hcaf(), am_hspen(), am_search_fuzzy(), download_db()

Examples

## Not run: 
am_search_exact()
am_search_exact(Species = "bucculentus")
am_search_exact(FBname = NULL, provider = NULL)

## End(Not run)

raquamaps/aquamapsdata documentation built on Feb. 25, 2021, 10:28 p.m.