HLA_AlignedSeqGet: Method for extracting aligned protein sequences for HLA genes

In rbentham/HLAdivR: Calculate diversity scores between HLA class I alleles

Method for extracting aligned protein sequences for HLA genes

Description

Upon the aligned protein sequences from IMGT produce the protein sequence for the given HLA allele

Usage

HLA_AlignedSeqGet(hla.allele, full = FALSE)

Arguments

hla.allele	HLA allele for genes HLA-A, HLA-B or HLA-C, in digit format A:01:01
full	logical of whether to output full sequence or sequence in relation to default HLA allele

Value

Aligned protein sequence of HLA allele

rbentham/HLAdivR documentation built on May 15, 2023, 1:30 p.m.