GetMitRibRatio: Mitochondrial-ribosomal RNA ratio
In rbr1/MLtiplet_2.0: scRNA-seq doublet/multiplet detection using multi-omic profiling
GetMitRibRatio R Documentation
Mitochondrial-ribosomal RNA ratio
Description
This function calculates the mitochondrial-ribosomal RNA ratio. It assumes that the
contains the mitichondrial gene IDs begin with the prefix "MT-" and that the
ribosomal gene IDs begin with the prefix "RP-". If this is not the case, then
the gene IDs can be specified.
Usage
GetMitRibRatio(object, mitrib = NULL, mito = NULL)
Arguments
object
= seurat object
mitrib
= ribosomal and mitichondrial gene IDs
mito
= mitichondrial gene IDs
Value
An array of mitochondrial-ribosomal RNA ratios per cell.
rbr1/MLtiplet_2.0 documentation built on April 11, 2024, 7:02 p.m.
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| GetMitRibRatio | R Documentation |
Mitochondrial-ribosomal RNA ratio
Description
This function calculates the mitochondrial-ribosomal RNA ratio. It assumes that the contains the mitichondrial gene IDs begin with the prefix "MT-" and that the ribosomal gene IDs begin with the prefix "RP-". If this is not the case, then the gene IDs can be specified.
Usage
GetMitRibRatio(object, mitrib = NULL, mito = NULL)
Arguments
object |
= seurat object |
mitrib |
= ribosomal and mitichondrial gene IDs |
mito |
= mitichondrial gene IDs |
Value
An array of mitochondrial-ribosomal RNA ratios per cell.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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