README.md
In rcastelo/VariantFiltering: Filtering of coding and non-coding genetic variants
VariantFiltering: Filtering of coding and non-coding genetic variants
Current build status
- release 
- development 
The VariantFiltering package aids at filtering genetic variants using
different criteria such as inheritance model, amino acid change consequence,
minor allele frequency across human populations, splice site strength,
conservation, etc.
Installation
You can install the VariantFiltering package from this GitHub repo using
the remotes package, as follows:
library(remotes)
install_github("rcastelo/VariantFiltering")
Provided that you have installed first all its Bioconductor dependencies;
see the DESCRIPTION file. The vignette contains an example on how to use it.
Questions, bug reports and issues
For bug reports and feature requests, please use the GitHub issues
tab
at the top-left of this page.
Contributing
Contributions to the software codebase of VariantFiltering are welcome as
long as contributors abide to the terms of the
Bioconductor Contributor Code of Conduct.
If you want to contribute to the development of VariantFiltering please open an
issue to start discussing
your suggestion or, in case of a bugfix or a straightforward feature, directly a
pull request.
Funding
This software project is supported in part by the Spanish
Ministry of Science, Innovation and Universities.
rcastelo/VariantFiltering documentation built on Feb. 1, 2025, 11:47 p.m.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
VariantFiltering: Filtering of coding and non-coding genetic variants
Current build status
- release
- development
The VariantFiltering package aids at filtering genetic variants using
different criteria such as inheritance model, amino acid change consequence,
minor allele frequency across human populations, splice site strength,
conservation, etc.
Installation
You can install the VariantFiltering package from this GitHub repo using
the remotes package, as follows:
library(remotes)
install_github("rcastelo/VariantFiltering")
Provided that you have installed first all its Bioconductor dependencies;
see the DESCRIPTION file. The vignette contains an example on how to use it.
Questions, bug reports and issues
For bug reports and feature requests, please use the GitHub issues tab at the top-left of this page.
Contributing
Contributions to the software codebase of VariantFiltering are welcome as
long as contributors abide to the terms of the
Bioconductor Contributor Code of Conduct.
If you want to contribute to the development of VariantFiltering please open an
issue to start discussing
your suggestion or, in case of a bugfix or a straightforward feature, directly a
pull request.
Funding
This software project is supported in part by the Spanish Ministry of Science, Innovation and Universities.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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