all_tcga2018_data: Data from 2018 TCGA studies from cBioPortal
In rebeccagreenblatt/CNViz: Copy Number Visualization
Description
Usage
Format
Source
Description
A dataset containing the study name and aggregated gene level copy number data
Usage
1
Format
A data frame with 14944 rows and 6 variables:
- hugoGeneSymbol
hugo gene symbol
- Gain
proportion of cohort with gain in this gene
- Amplification
proportion of cohort with amplification in this gene
- ShallowDeletion
proportion of cohort with shallow deletion in this gene
- DeepDeletion
proportion of cohort with deep deletion in this gene
- study_name
cancer type and sample size
Source
https://github.com/waldronlab/cBioPortalData See data-raw folder.
rebeccagreenblatt/CNViz documentation built on Feb. 3, 2022, 1:50 a.m.
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Description Usage Format Source
Description
A dataset containing the study name and aggregated gene level copy number data
Usage
1 |
Format
A data frame with 14944 rows and 6 variables:
- hugoGeneSymbol
hugo gene symbol
- Gain
proportion of cohort with gain in this gene
- Amplification
proportion of cohort with amplification in this gene
- ShallowDeletion
proportion of cohort with shallow deletion in this gene
- DeepDeletion
proportion of cohort with deep deletion in this gene
- study_name
cancer type and sample size
Source
https://github.com/waldronlab/cBioPortalData See data-raw folder.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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