Man pages for reconhub/branchr
R Estimation from Cluster Sizes
| alpha_poisson | Obtain alpha for a Poisson offspring distribution |
| element_Lhood_poisson | # Likelihood of observing outbreaks of size y given... |
| f_z_poiss | Compute the probability of observing an outbreak of size z... |
| import | # Likelihood of observing outbreaks of size y given... |
| proba_ext | Compute the probability of extinction for a given alpha |
| proba_observation | Obtain intermediate useful quantities |
| profile_likelihood | Profile likelihood for R given observations, rho, threshold,... |
| R_eff_poisson | Obtain an effective R when conditionning on extinction and... |
| simulate_poisson | Simulate a partially observed Poisson branching process with... |
| theta_max_likelihood | Obatin the maximium likleihood from a vector of parameter and... |
