alpha_poisson | Obtain alpha for a Poisson offspring distribution |
element_Lhood_poisson | # Likelihood of observing outbreaks of size y given... |
f_z_poiss | Compute the probability of observing an outbreak of size z... |
import | # Likelihood of observing outbreaks of size y given... |
proba_ext | Compute the probability of extinction for a given alpha |
proba_observation | Obtain intermediate useful quantities |
profile_likelihood | Profile likelihood for R given observations, rho, threshold,... |
R_eff_poisson | Obtain an effective R when conditionning on extinction and... |
simulate_poisson | Simulate a partially observed Poisson branching process with... |
theta_max_likelihood | Obatin the maximium likleihood from a vector of parameter and... |
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