Man pages for reedssorenson/RNAdecay
Maximum Likelihood Decay Modeling of RNA Degradation Data

a_highcalculates bounds for modeled parameters
aicAkaike information criterion (with correction)
colsIndexes column names of a data.frame matching multiple...
comb_cvcombined adjusted coefficient of variation
const_decayexponential decay functions
constraint_fun_list_makercontraint function list maker
decay_dataNormalized RNA abundance RNA decay timecourse
decay_plotdecay_plot() function
fit_varsigma^2 estimation
groupingsCombinatorial groups matrix generator
group_mapmodel color map
hl_plothl_plot() function
log_liklog likelihood
modelsExample double exponential decay modeling results
mod_optimizationmodel optimization for fitting exponential decay models to...
n_parnumber of Parameters function
plain_themea custom ggplot2 theme
resultsExample double exponential decay modeling results
RPMsRNA abundance reads per million over RNA decay timecourse
sse_null_decaying_decaysum of the squared errors for null models
reedssorenson/RNAdecay documentation built on Oct. 28, 2023, 11:31 a.m.