makeplot: Making plots to visualize nonlinear associations

In reese3928/NBAMSeq: Negative Binomial Additive Model for RNA-Seq Data

Description

This function makes plots to visualize nonlinear associations.

Usage

makeplot(object, phenoname, genename, ...)

Arguments

object	a NBAMSeqDataSet object
phenoname	the name of nonlinear variable to be visualized
genename	the name of gene to be visualized
...	additional arguments provided to plot.gam

Value

the plot made by plot.gam() function

Examples

gsd = makeExample(n = 3, m = 10)
gsd = NBAMSeq(gsd)
makeplot(gsd, "pheno", "gene3", main = "gene10")

reese3928/NBAMSeq documentation built on Oct. 29, 2020, 8:06 a.m.