fpkm: An example of FPKM data
In reese3928/RNAAgeCalc: A multi-tissue transcriptional age calculator
Description
Usage
Format
References
Description
This is an example of FPKM data. It is the gene expression
FPKM data from The genotype-tissue expression (GTEx) project brain samples.
The data was downloaded from
recount2(https://jhubiostatistics.shinyapps.io/recount/). For
illustration purpose, only two samples were included. The R script to
generate this example data can be found in inst/scripts/createExamples.R.
Usage
1
Format
A data frame which contains the fpkm data. The dimension of this
data frame is 24989 by 2. Each row is a gene and each column is a sample.
References
Collado-Torres, Leonardo, et al. "Reproducible RNA-seq analysis
using recount2." Nature biotechnology 35.4 (2017): 319-321.
Lonsdale, John, et al. "The genotype-tissue expression (GTEx)
project." Nature genetics 45.6 (2013): 580.
reese3928/RNAAgeCalc documentation built on Sept. 25, 2020, 1:01 a.m.
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Description Usage Format References
Description
This is an example of FPKM data. It is the gene expression FPKM data from The genotype-tissue expression (GTEx) project brain samples. The data was downloaded from recount2(https://jhubiostatistics.shinyapps.io/recount/). For illustration purpose, only two samples were included. The R script to generate this example data can be found in inst/scripts/createExamples.R.
Usage
1 |
Format
A data frame which contains the fpkm data. The dimension of this data frame is 24989 by 2. Each row is a gene and each column is a sample.
References
Collado-Torres, Leonardo, et al. "Reproducible RNA-seq analysis using recount2." Nature biotechnology 35.4 (2017): 319-321.
Lonsdale, John, et al. "The genotype-tissue expression (GTEx) project." Nature genetics 45.6 (2013): 580.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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