Description Usage Arguments Examples
Wrapper function for age2length
and length2weight
to estimate weight in each cell from fish
.
1 2 3 | fish2weight(fish, ages, l_to_w_int = 1.1e-05, l_to_w_power = 2.91,
Linf_mean = 112.03, Linf_SD = 10.46/1.96, k_mean = 0.13,
k_SD = 0.021/196, t0 = 0.18)
|
fish |
a matrix of fish numbers by site (rows) and by age (columns). Can easily be generated by |
ages |
The ages of the fish of the fish to be converted to weight (year) |
l_to_w_int |
The intercept in the Length-weight relationship |
l_to_w_power |
The power in the Length-weight relationship |
Linf_mean |
Von Bertalanffy growth model parameter - mean asymptotic length (cm) |
Linf_SD |
Von Bertalanffy growth model parameter - standard deviation asymptotic length (cm) |
k_mean |
Von Bertalanffy growth model parameters - mean growth coefficient (1/year) |
k_SD |
Von Bertalanffy growth model parameters - standard deviation growth coefficient (1/year) |
t0 |
Von Bertalanffy growth model parameters - x intercept (year) |
1 2 3 4 | # create a fish matrix
fish <- initpop(initial_abun=250*10^6,cells=length(BESTMPA_domain),maxage=50,rate=0.7)
# calculate weight
fish2weight(fish,ages=0:20,l_to_w_int=0.000011,l_to_w_power=2.91,Linf_mean=112.03,Linf_SD=10.46/1.96,k_mean=0.13,k_SD=0.021/196,t0=0.18)
|
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