Man pages for rformassspectrometry/MsCoreUtils
Core Utils for Mass Spectrometry Data
| aggregate | Aggreagate quantitative features |
| binning | Binning |
| breaks_ppm | Sequence with increasing difference between elements |
| check | Check functions |
| coerce | Coerce functions |
| colCounts | Counts the number of features |
| common_path | Extract the common file path |
| distance | Spectra Distance/Similarity Measurements |
| entropy | Spectral entropy |
| estimateBaseline | Estimates the Baseline of a Mass Spectrum |
| force_sorted | Forcing a numeric vector into a monotonously increasing... |
| formatRt | Format Retention Time |
| gnps | GNPS spectrum similarity scores |
| group | Grouping of numeric values by similarity |
| i2index | Input parameter check for subsetting operations |
| imputation | Quantitative mass spectrometry data imputation |
| localMaxima | Local Maxima |
| matching | Relaxed Value Matching |
| maxi | Maximum MS Intensity Value |
| medianPolish | Return the Median Polish (Robust Twoway Decomposition) of a... |
| noise | Noise Estimation |
| normalize | Quantitative data normalisation |
| peakRegionMask | Peak Region Mask |
| ppm | PPM - Parts per Million |
| range | Range helper functions |
| rbindFill | Combine R Objects by Row |
| reduce | Reduce overlapping numeric ranges to disjoined ranges |
| refineCentroids | Refine Peak Centroids |
| rla | Calculate relative log abundances |
| robustSummary | Return the Robust Expression Summary of a matrix |
| smooth | Smoothing |
| sumi | Summing MS Intensity Values |
| validation | Validation functions |
| valleys | Find Peak Valleys |
| vapply | vapply wrappers |
| which | Which is the first/last TRUE value. |
