force_sorted: Forcing a numeric vector into a monotonously increasing...

In rformassspectrometry/MsCoreUtils: Core Utils for Mass Spectrometry Data

Forcing a numeric vector into a monotonously increasing sequence.

Description

This function performs interpolation on the non-increasing parts of a numeric input vector to ensure its values are monotonously increasing. If the values are non-increasing at the end of the vector, these values will be replaced by a sequence of numeric values, starting from the last increasing value in the input vector, and increasing by a very small value, which can be defined with parameter by

Usage

force_sorted(x, by = .Machine$double.eps)

Arguments

x	numeric vector.
by	numeric(1) value that will determine the monotonous increase in case the values at the end of the vector are non-increasing and therefore interpolation would not be possible. Defaults to by = .Machine$double.eps which is the smallest positive floating-point number x such that 1 + x != 1.

Value

A vector with continuously increasing values.

Note

NA values will not be replaced and be returned as-is.

Examples

x <- c(NA, NA, NA, 1.2, 1.1, 1.14, 1.2, 1.3, NA, 1.04, 1.4, 1.6, NA, NA)
y <- force_sorted(x)
is.unsorted(y, na.rm = TRUE)

## Vector non increasing at the end
x <- c(1, 2, 1.5, 2)
y <- force_sorted(x, by = 0.1)
is.unsorted(y, na.rm = TRUE)

## We can see the values were not interpolated but rather replaced by the
## last increasing value `2` and increasing by 0.1.
y

rformassspectrometry/MsCoreUtils documentation built on Oct. 24, 2024, 1:52 p.m.