rformassspectrometry/PSM: Handling and Managing Peptide Spectrum Matches
The PSMatch package helps proteomics practitioners to load, handle and manage Peptide Spectrum Matches. It provides functions to model peptide-protein relations as adjacency matrices and connected components, visualise these as graphs and make informed decision about shared peptide filtering. The package also provides functions to calculate and visualise MS2 fragment ions.
Getting started
Browse package contents
Package details |
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| Bioconductor views | Infrastructure MassSpectrometry Proteomics |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 1.11.1 |
| URL | https://github.com/RforMassSpectrometry/PSM |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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