epd_promoter_epigenetic_features: Epigenetic features at EPD promoters from Roadmap Epigenomics...
In rheery/MethylDriver: Find driver methylation events in cancer
epd_promoter_epigenetic_features R Documentation
Epigenetic features at EPD promoters from Roadmap Epigenomics Project
Description
A data.frame with epigenetic features for epd_autosomal_protein_coding_gene_promoters from the Roadmap Epigenomics project
Usage
epd_promoter_epigenetic_features
Format
A data.frame with 23,208 rows and 878 columns, with rows corresponding to promoters and columns to epigenetic features from the Roadmap Epigenetics Project
Source
Roadmap data was downloaded from https://egg2.wustl.edu/roadmap/data/byFileType/peaks/consolidated/broadPeak/ and promoter values were calculated using the
bigwigaverageoverbed tool from UCSC
rheery/MethylDriver documentation built on Dec. 10, 2022, 7:28 a.m.
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| epd_promoter_epigenetic_features | R Documentation |
Epigenetic features at EPD promoters from Roadmap Epigenomics Project
Description
A data.frame with epigenetic features for epd_autosomal_protein_coding_gene_promoters from the Roadmap Epigenomics project
Usage
epd_promoter_epigenetic_features
Format
A data.frame with 23,208 rows and 878 columns, with rows corresponding to promoters and columns to epigenetic features from the Roadmap Epigenetics Project
Source
Roadmap data was downloaded from https://egg2.wustl.edu/roadmap/data/byFileType/peaks/consolidated/broadPeak/ and promoter values were calculated using the bigwigaverageoverbed tool from UCSC
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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