autoplot.WA: autoplot for rioja transfer functions

In richardjtelford/ggpalaeo: ggplot2 Plots For analogue and rioja Packages

Description

Plots of predicted against measured environmental variables for transfer functions made with the rioja package.

Usage

## S3 method for class 'WA'
fortify(object, column = "WA.inv")

## S3 method for class 'WAPLS'
fortify(object, npls = 1)

## S3 method for class 'MLRC'
fortify(object)

## S3 method for class 'MAT'
fortify(object, k = 5, weighted = FALSE)

fortify_tf(object, column)

## S3 method for class 'WAPLS'
autoplot(object, npls, ...)

## S3 method for class 'WA'
autoplot(object, ...)

## S3 method for class 'MAT'
autoplot(object, k = 5, weighted = FALSE, ...)

## S3 method for class 'MLRC'
autoplot(object, ...)

autoplot_tf(object, show_apparent = FALSE, residuals = FALSE,
  smooth = TRUE, ...)

Arguments

object	transfer function object from rioja
column	character, name of column to plot
npls	integer, WAPLS component to plot
k	integer, MAT number of analogues to plot
weighted	logical, plot weighted MAT results?
...	Arguments specific to different models.
show_apparent	logical, show apparent performance as well as cross-validated
residuals	logical, show cross-validated residuals
smooth	logical, add smooth to plot

Examples

require("rioja")
require("ggplot2")
data(ImbrieKipp, SumSST, V12.122, package = "analogue")
mod <- MAT(ImbrieKipp, SumSST)
autoplot(mod)

richardjtelford/ggpalaeo documentation built on Dec. 7, 2018, 7:55 a.m.