richelbilderbeek/beastscriptr: 'BEAUti' from R

'BEAST2' (<http://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAUti 2' (which is part of 'BEAST2') is a GUI tool that allows users to specify the many possible setups and generates the XML file 'BEAST2' needs to run. This package provides a way to create 'BEAST2' input files without active user input, but using R function calls instead.

Getting started

Package details

MaintainerRichel J.C. Bilderbeek <[email protected]>
LicenseGPL-3 | file LICENSE
Version2.1
URL https://github.com/ropensci/beautier
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("richelbilderbeek/beastscriptr")
richelbilderbeek/beastscriptr documentation built on Jan. 10, 2019, 1:14 p.m.