Man pages for richelbilderbeek/ggdaisie
| get_daisie_data | Read a data frame from the 'data' folder |
| get_daisy_input_statuses | DAISIE input statuses as used by 'DAISIE_dataprep' |
| get_ggdaisy_states | Get the states a phylogeny edge can be in. These states are... |
| ggdaisie | Plot a DAISIE data table |
| ggd_brts_to_rnd_phylo | Create a comb phylogeny from branch length |
| ggd_create_phylo | Create a phylogeny with the correct statuses |
| ggd_create_phylo_endemic | Create a phylogeny with the correct statuses |
| ggd_create_phylo_non_endemic | Create a phylogeny with the correct statuses |
| ggd_create_phylo_non_endemic_max_age | Create a phylogeny with the correct statuses |
| ggd_create_phylos | Creku Plot a DAISIE data table |
| ggd_plot | Plot the phylogenies at the same scale |
| plot_phylo_with_stem | Plot a phylogeny with a stem |
| plot_phylo_with_stem_ape | Plot a phylogeny with a stem using ape |
| plot_phylo_with_stem_ggtree | Plot a phylogeny with a stem using ape |
