Files in richelbilderbeek/mhcnpreds
MHCnuggets Predictions
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/convert_haplotype_id_to_haplotype.R
R/convert_haplotype_ids_to_haplotypes.R
R/convert_haplotype_to_haplotype_id.R
R/convert_haplotypes_to_haplotype_ids.R
R/convert_ic50s_to_quantiles.R
R/convert_quantile_to_ic50.R
R/create_random_peptide.R
R/default_params_doc.R
R/get_haplotype_lut.R
R/get_ic50_threshold.R
R/get_lut.R
R/get_lut_filename.R
R/mhcnpreds.R
README.md
inst/extdata/random_h100_10.csv
inst/extdata/random_h100_13.csv
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man/convert_haplotype_id_to_haplotype.Rd
man/convert_haplotype_ids_to_haplotypes.Rd
man/convert_haplotype_to_haplotype_id.Rd
man/convert_haplotypes_to_haplotype_ids.Rd
man/convert_ic50s_to_quantiles.Rd
man/convert_quantile_to_ic50.Rd
man/convert_quantile_to_ic50_new.Rd
man/convert_quantile_to_ic50_old.Rd
man/create_random_peptide.Rd
man/default_params_doc.Rd
man/figures/AppVeyor.png
man/figures/Codecov.png
man/figures/TravisCI.png
man/get_haplotype_lut.Rd
man/get_ic50_threshold.Rd
man/get_lut.Rd
man/get_lut_filename.Rd
man/mhcnpreds.Rd
mhcnpreds.Rproj
scripts/.gitignore
scripts/build_cran.sh
scripts/create_luts/.Rbuildignore
scripts/create_luts/.gitignore
scripts/create_luts/.travis.yml
scripts/create_luts/Makefile
scripts/create_luts/create_lut.R
scripts/create_luts/create_luts.R
scripts/create_luts/luts_20200805.zip
scripts/create_luts/make.sh
scripts/measure_speed/measure_speed.R
scripts/show_ic50s/README.md
scripts/show_ic50s/compare_versions.R
scripts/show_ic50s/compare_versions_p0.png
scripts/show_ic50s/compare_versions_p100.png
scripts/show_ic50s/compare_versions_p5.png
scripts/show_ic50s/compare_versions_p50.png
scripts/show_ic50s/compare_versions_p95.png
scripts/show_ic50s/compare_versions_p99.png
scripts/show_ic50s/create_table.R
scripts/show_ic50s/ic50s_v0_2.csv
scripts/show_ic50s/ic50s_v0_3.csv
tests/testthat.R
tests/testthat/test-convert_haplotype_id_to_haplotype.R
tests/testthat/test-convert_haplotype_ids_to_haplotypes.R
tests/testthat/test-convert_haplotype_to_haplotype_id.R
tests/testthat/test-convert_haplotypes_to_haplotype_ids.R
tests/testthat/test-convert_ic50s_to_quantiles.R
tests/testthat/test-convert_quantile_to_ic50.R
tests/testthat/test-create_random_peptide.R
tests/testthat/test-get_haplotype_lut.R
tests/testthat/test-get_ic50_threshold.R
tests/testthat/test-get_lut.R
tests/testthat/test-get_lut_filename.R
