README.md

In rietho/IPO: Automated Optimization of XCMS Data Processing parameters

IPO

Latest release: Devel: @master:

IPO (‘Isotopologue Parameter Optimization’) is a tool for automated Optimization of XCMS Parameters. It is a fast and free of labeling steps, and applicable to data from different kinds of samples and data from different methods of liquid chromatography - high resolution mass spectrometry and data from different instruments.

Find out more about the usage in the package vignette (Biocondcutor development version). The publication is available from http://www.biomedcentral.com/1471-2105/16/118.

Installation

Get the latest release version from Bioconductor:

## try http:// if https:// URLs are not supported
if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("IPO")
````

Or the development version from [Github](https://github.com/rietho/IPO/):

```R
# install.packages("devtools")
devtools::install_github("rietho/IPO") 

rietho/IPO documentation built on Dec. 6, 2022, 8:17 a.m.