fit_mcmc: Set up MCMC Chain

In rje42/DAGtools: Tools for fitting and analysing DAGs via MCMC

Set up MCMC Chain

Description

Set up MCMC Chain

Usage

fit_mcmc(data, scoretype = "bge", iterations, ...)

Arguments

data	dataset to fit
scoretype	type of score: "bge" or "bde"
iterations	number of iterations
...	other arguments to pass to partitionMCMC

Details

This is basically a wrapper for BiDAG's scoreparameters() and partitionMCMC(), but which augments the chain with an array of sampled adjacencies, the number of samples and variables, and the average adjacency. Variable names are also extracted from the original data set.

Value

An object of class summary_MCMCchain.

rje42/DAGtools documentation built on June 6, 2024, 3:13 a.m.