Man pages for rkuiper/geneClassifiers
Application of gene classifiers

bracket-methods	Extract
ClassifierParameters	An S4 class to store classifier parameters.
ClassifierResults	An S4 class to store classifier results.
dim-methods	Dimensions of an Object
exampleMAS5	Example MAS5.0 ExpressionSet
FixedExpressionData	An S4 class to store classifier parameters.
geneClassifiers-package	geneClassifiers: Application of gene classifiers
getBatchCorrection-methods	Obtain the batch correction status for a classifier result.
getCitations-methods	Obtain citations to the classifier
getClassifications-methods	Obtain classifier classifications.
getClassifier-methods	Obtain a classifier definition.
getDecisionBoundaries-methods	Obtain the decision boundaries defined for the classifier.
getDescription-methods	Obtain classifiers' description.
getEventChain-methods	Obtain classifiers' event chain.
getIntercept-methods	Obtain classifiers' intercept.
getMeans-methods	Obtain classifiers' reference means.
getName-methods	Obtain object names.
getNormalizationMethod-methods	Obtain normalization method
getProbeNames-methods	Obtain probe-set names.
getScores-methods	Obtain classifier score.
getSds-methods	Obtain classifiers' reference standard deviations.
getTargetValue-methods	Obtain the targetValue
getTrainingData-methods	Obtain classifier training data.
getWeightingType-methods	Obtain the weighting type used to obtain a classifier result.
getWeights-methods	Obtain classifier weights.
runClassifier-methods	Perform classification.
setNormalizationMethod-methods	Prepare data.
showClassifierList-methods	Show classifier names and descriptions.