readme.md
In rmoffitt/aged: Automatic Gene Expression Deconvolution Using NMF
AGED: Automatic Gene Expression Deconvolution
AGED is an R package which performs automatic gene expression deconvolution by utilizing non-negative matrix factorization (NMF) and gene set enrichment analysis (GSEA) in a single pipeline function. Without any preprocessing or mathematical knowledge needed from the user's end, AGED is a ready-to-use deconvolution tool suited for all users regardless of mathematical background.
Furthermore, the AGED package provides the user with a set of visualization functions that provide a consistent, publication-ready aesthetic for displaying his/her/their deconvolution results.
Install
devtools::install_github("rmoffitt/aged")
rmoffitt/aged documentation built on Aug. 11, 2022, 7:07 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
AGED: Automatic Gene Expression Deconvolution
AGED is an R package which performs automatic gene expression deconvolution by utilizing non-negative matrix factorization (NMF) and gene set enrichment analysis (GSEA) in a single pipeline function. Without any preprocessing or mathematical knowledge needed from the user's end, AGED is a ready-to-use deconvolution tool suited for all users regardless of mathematical background.
Furthermore, the AGED package provides the user with a set of visualization functions that provide a consistent, publication-ready aesthetic for displaying his/her/their deconvolution results.
Install
devtools::install_github("rmoffitt/aged")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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