djvdj-package: djvdj: A collection of single-cell V(D)J tools
In rnabioco/djvdj: A collection of single-cell V(D)J tools
djvdj-package R Documentation
djvdj: A collection of single-cell V(D)J tools
Description
djvdj provides a single-cell V(D)J analysis workflow that integrates with popular single-cell data structures. This includes the ability to cluster CDR3 sequences and to quantify repertoire diversity, repertoire similarity, and gene segment usage. Tools are also provided to generate a variety of visualizations including rarefaction curves, circos plots and UMAP projections.
Author(s)
Maintainer: Ryan Sheridan ryan.sheridan@cuanschutz.edu (ORCID)
Other contributors:
Jay Hesselberth jay.hesselberth@gmail.com [contributor]
Rui Fu raysinensis@gmail.com [contributor]
Kent Riemondy kent.riemondy@ucdenver.edu [contributor]
RNA Bioscience Initiative [funder]
See Also
Useful links:
rnabioco/djvdj documentation built on Oct. 24, 2023, 7:33 p.m.
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| djvdj-package | R Documentation |
djvdj: A collection of single-cell V(D)J tools
Description
djvdj provides a single-cell V(D)J analysis workflow that integrates with popular single-cell data structures. This includes the ability to cluster CDR3 sequences and to quantify repertoire diversity, repertoire similarity, and gene segment usage. Tools are also provided to generate a variety of visualizations including rarefaction curves, circos plots and UMAP projections.
Author(s)
Maintainer: Ryan Sheridan ryan.sheridan@cuanschutz.edu (ORCID)
Other contributors:
Jay Hesselberth jay.hesselberth@gmail.com [contributor]
Rui Fu raysinensis@gmail.com [contributor]
Kent Riemondy kent.riemondy@ucdenver.edu [contributor]
RNA Bioscience Initiative [funder]
See Also
Useful links:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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