remove_common_contaminants: remove_common_contaminants
In robertyoung3/MSanalyzeNOM: Utilities for Analyzing Complex Natural Organic Matter (NOM) Mixtures After Formula Assignment
Description
Usage
Arguments
Value
View source: R/remove_common_contaminants.R
Description
This function removes LAS surfactants and stearic and palmitic acids from the
assigned formulas. It can be useful for visualizing the remaining NOM
components, but should not be used without appropriate disclosure and
annotation. Removing these contaminants also doesn't remove their influence
on the other detected ions and assigned formulas, which can be reduced in
number due to the presence of high abundance contaminants.
Usage
1
Arguments
df
a tibble containing the following column names: "chem_formula",
"class_hetero", "KMD_CH2" (from the compute_KMD_CH2() function),
"z_CH2" (from the compute_z_CH2() function), and "rel_abund"
Value
df after removing the specified contaminants
robertyoung3/MSanalyzeNOM documentation built on June 7, 2021, 7:46 a.m.
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Description Usage Arguments Value
View source: R/remove_common_contaminants.R
Description
This function removes LAS surfactants and stearic and palmitic acids from the assigned formulas. It can be useful for visualizing the remaining NOM components, but should not be used without appropriate disclosure and annotation. Removing these contaminants also doesn't remove their influence on the other detected ions and assigned formulas, which can be reduced in number due to the presence of high abundance contaminants.
Usage
1 |
Arguments
df |
a tibble containing the following column names: "chem_formula", "class_hetero", "KMD_CH2" (from the compute_KMD_CH2() function), "z_CH2" (from the compute_z_CH2() function), and "rel_abund" |
Value
df after removing the specified contaminants
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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