path_vector_new: Faster way to record a path through all nodes of an adjacency...
In robjohnnoble/ggmuller: Create Muller Plots of Evolutionary Dynamics
path_vector_new R Documentation
Faster way to record a path through all nodes of an adjacency matrix
Description
Nodes are traversed in the order that they should be stacked in a Muller plot.
Each node appears exactly twice.
Usage
path_vector_new(
tree,
i = NULL,
Adj = NULL,
Col = NULL,
is_leaf = NULL,
path = NULL
)
Arguments
tree
Dataframe comprising an adjacency matrix, with column names "Parent" and "Identity"
i
Current node
Adj
Adjacency matrix
Col
Node label
is_leaf
Label whether node is a leaf
path
The path vector so far
Value
A list, including a vector specifying the path.
Author(s)
Rob Noble, robjohnnoble@gmail.com
Examples
edges1 <- data.frame(Parent = c(1,1,1,3,3), Identity = 2:6)
path_vector_new(edges1)$path
robjohnnoble/ggmuller documentation built on Sept. 18, 2023, 2:09 p.m.
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| path_vector_new | R Documentation |
Faster way to record a path through all nodes of an adjacency matrix
Description
Nodes are traversed in the order that they should be stacked in a Muller plot. Each node appears exactly twice.
Usage
path_vector_new(
tree,
i = NULL,
Adj = NULL,
Col = NULL,
is_leaf = NULL,
path = NULL
)
Arguments
tree |
Dataframe comprising an adjacency matrix, with column names "Parent" and "Identity" |
i |
Current node |
Adj |
Adjacency matrix |
Col |
Node label |
is_leaf |
Label whether node is a leaf |
path |
The path vector so far |
Value
A list, including a vector specifying the path.
Author(s)
Rob Noble, robjohnnoble@gmail.com
Examples
edges1 <- data.frame(Parent = c(1,1,1,3,3), Identity = 2:6)
path_vector_new(edges1)$path
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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