fs2: Example FCS flowSet
In rogerswt/flowFP: Fingerprinting for Flow Cytometry
Description
Usage
Format
Details
Source
References
Examples
Description
An example FCS flowSet.
Usage
1
Format
This is an object of class flowSet composed of 7
flowFrames.
Details
The flowSet corresponds to a Leukemia/Lymphoma panel for
a sample. Each flowFrame correponds to one tube. The
first one is an isotype control, and the rest are stained with
different antibody cocktails. Parameter 5 (FL3 Log) is notable
in that it is CD45-ECD for all of the tubes. This makes it possible
to gate the entire collection of tubes using CD45 vs SSC. In this set,
the CD45 vs SSC distribution in Tube 5 differs significantly as
compared with the other tubes.
column names:
FS Lin SS Log FL1 Log FL2 Log FL3 Log FL4 Log FL5 Log
Source
Data were generously provided by Clarient, Inc.
References
W.T. Rogers and H. A. Holyst, “flowFP: A Bioconductor Package for Fingerprinting
Flow Cytometric Data”, Submitted to: Advances in Bioinformatics, April 1, 2009.
Examples
1
rogerswt/flowFP documentation built on Aug. 26, 2020, 9:40 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Details Source References Examples
Description
An example FCS flowSet.
Usage
1 |
Format
This is an object of class flowSet composed of 7 flowFrames.
Details
The flowSet corresponds to a Leukemia/Lymphoma panel for a sample. Each flowFrame correponds to one tube. The first one is an isotype control, and the rest are stained with different antibody cocktails. Parameter 5 (FL3 Log) is notable in that it is CD45-ECD for all of the tubes. This makes it possible to gate the entire collection of tubes using CD45 vs SSC. In this set, the CD45 vs SSC distribution in Tube 5 differs significantly as compared with the other tubes.
column names: FS Lin SS Log FL1 Log FL2 Log FL3 Log FL4 Log FL5 Log
Source
Data were generously provided by Clarient, Inc.
References
W.T. Rogers and H. A. Holyst, “flowFP: A Bioconductor Package for Fingerprinting Flow Cytometric Data”, Submitted to: Advances in Bioinformatics, April 1, 2009.
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.