Description Usage Arguments Details Value
View source: R/pipeline-helpers.R
The dplyr join functions are a little on the slow side for very large
tables. This version converts its inputs
data.table
structures, and uses that package's
faster indexing capabilities to do a faster join.
1 | fast_left_join(left, right, by)
|
left |
The left-side table to join. Any class inheriting from
|
right |
The right-side table to join. Any class inheriting from
|
by |
Character vector of column names to join by. |
Because there is some overhead associated with setting up and indexing the data.table structures, this function is only useful when the right-side table is big enough that the savings in the join to make up for the overhead. Therefore, this function should only be used for joins that are demonstrably causing bottlenecks due to the size of the tables involved. This version should never be the first choice in development. As a rule of thumb, any join that is taking more than 500ms using the dplyr join functions is a candidate for this function.
When using this function, be aware that data.table has some slightly
different conventions for handling duplicated columns that are not being
joined on. Suppose we have tables A
and B
, both of which have
a column value
that is not being joined on. Then,
AB <- dplyr::left_join(A, B)
will have columns AB$value.x
with
the values from table A
and AB$value.y
with the values from
table B
. In AB <- gcamdata::fast_left_join(A, B)
, the
corresponding columns will be AB$i.value
for the values from table
A
, and AB$value
(sic) for the values from table
B
. This function makes no attempt to correct the column names in the
result to conform to the dplyr convention, and is therefore not exactly a
drop-in replacement for left_join
. However, it is usually easy enough
to make corrections on the returned value.
Since this function is intended only for specialized use, we don't provide any of the other join variants like first-only or error-no-match. The cases where that extra functionality is needed and the tables involved are too large for the slower version of join are uncommon enough that they can be handled on a case by case basis. (That's documentation-speak for "You're on your own.")
The left join of left
and right
. It will be returned
as a tbl_df
, irrespective of the type of the inputs.
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