relabel_summarize: Relabel input point pattern and calcluate summary functions

In rolandrolandroland/rTEM: R package for statistical analysis of TEM data

Relabel input point pattern and calcluate summary functions

Description

takes an input binary point pattern, randomly relabels it while maintainig the same ratio of marks, and calculates summary functions. Can then use average_relabelings to find averages and envelopes

Usage

relabel_summarize(
  seed,
  pattern,
  funcs = c("K", "G", "F", "GXGH"),
  dopant_formula,
  host_formula,
  k = 1,
  maxKr = 10,
  nKr = 200,
  maxGr = 5,
  nGr = 1000,
  maxGXGHr = 3,
  maxGXHGr = 8,
  nGXr = 1000,
  vside = 0.3,
  K_cor = "trans",
  G_cor = "km",
  F_cor = "km",
  GXGH_cor = "km",
  GXHG_cor = "km",
  G2_cor = "km"
)

Arguments

seed	number to use in 'set.seed' for reproducibility
pattern	point pattern of type ppp or pp3
funcs	vector of summary functions to calculate
dopant_formula	mark of points from which to calculate summary functions
host_formula	marks of points to not use in summary functions (except cross type functions)
maxKr	a numeric
nKr	a numeric
maxGr	a numeric
nGr	a numeric
maxGXGHr	a numeric
maxGXHGr	a numeric
nGXr	a numeric
K_cor	edge correction(s) to be used for K function
G_cor	edge correction(s) to be used for G function
F_cor	edge correction(s) to be used for F function
GXGH_cor	edge correction(s) to be used for GXGH function
GXHG_cor	edge correction(s) to be used for GXHG function

Value

summary functions listed in 'funcs' variable

rolandrolandroland/rTEM documentation built on March 29, 2025, 2:17 p.m.