runMICE: Run a simulation of the MICE model

Description Usage Arguments Value

View source: R/mice-main.R

Description

Run a simulation of the MICE model

Usage

1
2
3
runMICE(groups, fleets, environment = NULL, T, ndtPerYear = 4,
  Mstarv = 0.3, Ystar = 3.5, delta = 0.9, par = NULL, Fmult = 1,
  prices = NULL, niter = 7, verbose = TRUE)

Arguments

groups

A list containing the information to create the functional groups. See details.

fleets

A list containing the information to create the fleets. See details.

environment

A list containing the environmental information. One value per time step is required.

ndtPerYear

Number of time steps per year.

Mstarv

Maximum starvation mortality.

Ystar

Optimal annual food ration per gram of biomass.

delta

Fraction of prey population available to predators.

par

A list with parameters values. These parameters take precedence over 'groups' and 'fleets'.

Fmult

Fishing multiplier. All the fishing mortalities are multiplied by this value.

niter

Number of iterations for the calculation of predation mortality.

verbose

Logical, should running messages be produced?

Value

A list with the abundance (N), length (L) and biomass (B) of all the species modeled.


roliveros-ramos/mice documentation built on Aug. 27, 2018, 11:08 a.m.