NEWS.md

In ropensci/BaseSet: Working with Sets the Tidy Way

BaseSet (development version)

BaseSet 1.0.0

• Now it is possible to list sets and elements that are not present in the relations but might be on the object via its factors: name_sets(), name_elements(), nElements() and nSets() gain a all argument.
• Fix a problem with $<- when the length did match a slot but the name didn't.
• Now it is possible to use sets and elements to subset a TidySet (but not for relations).
• New dimnames() and names() functions to discover the names of the data in the slots.
• Minor changes to getGAF() to improve speed.
• Increase R version dependency to 4.1 to remove magrittr dependency.

BaseSet 0.9.0

• tidy() now defaults to tidySet().
• New function union_closed().
• Make more robust the code to unwanted dimensions drops.
• power_set() returns also the sets of size 1 and have better names by default.
• Extractors [, $, [[ and setters [<-, $<-, [[<- now work for TidySets:
  • i indicates rows,
  • j either "relations", "sets" or "elements"
  • k the columns of the slot.

However TS[["A"]] extracts set "A" and replacing it via [[<- will remove it. Completion of $ works. length() returns the number of sets (to complete ncol and nrow). * lengths() returns the number of relations for each set.

BaseSet 0.0.17

• Fixing test when missing a package.
• Adding copyright holder.

BaseSet 0.0.16

• Update Code of Conduct to rOpenSci template
• Fix NOTE about LazyData

BaseSet 0.0.15

• Upgrade R version requirements
• Fix some links
• Make sure that vignettes run when the Bioconductor packages are available

BaseSet 0.0.14

• Remove unused dependency to BiocStyle
• Fix unicode characters for windows

BaseSet 0.0.12

BaseSet 0.0.0.9000

• Added a NEWS.md file to track changes to the package.

ropensci/BaseSet documentation built on Feb. 21, 2025, 3:11 p.m.