ropensci/infx
OpenBIS API Access to the InfectX Data Repository

Package index
Search the ropensci/infx package
Vignettes
Functions
452
Source code
44
Man pages
24
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ropensci/infx: OpenBIS API Access to the InfectX Data Repository
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API

API for ropensci/infx
OpenBIS API Access to the InfectX Data Repository

Global functions
[.json_class Man page
[.json_vec Man page
[<-.json_vec Man page
[[.json_vec Man page
[[<-.json_vec Man page
`[.json_class` Source code
`[.json_vec` Source code
`[<-.json_vec` Source code
`[[.json_vec` Source code
`[[<-.json_vec` Source code
any_field_clause Man page Source code
any_property_clause Man page Source code
api_url Man page Source code
as.json_class Man page
as.json_vec Man page
as.list.json_class Man page Source code
as.list.json_vec Man page Source code
as_experiment_id Man page Source code
as_experiment_id.Experiment Man page Source code
as_experiment_id.ExperimentIdentifier Man page Source code
as_generic Source code
as_generic_mat_id Man page Source code
as_generic_mat_id.MaterialGeneric Man page
as_generic_mat_id.MaterialIdentifierGeneric Man page Source code
as_generic_mat_id.MaterialIdentifierScreening Man page
as_generic_mat_id.MaterialScreening Man page
as_json_class Man page Source code
as_json_class.default Man page Source code
as_json_class.json_class Man page Source code
as_json_class.json_vec Man page Source code
as_json_class.list Man page Source code
as_json_vec Man page Source code
as_json_vec.default Man page
as_json_vec.json_class Man page Source code
as_json_vec.json_vec Man page Source code
as_json_vec.list Man page Source code
as_list Man page
as_mat_id Source code
as_plate_id Man page Source code
as_plate_id.Plate Man page Source code
as_plate_id.PlateIdentifier Man page Source code
as_plate_id.PlateMetadata Man page Source code
as_plate_id.Sample Man page Source code
as_screening Source code
as_screening_mat_id Man page Source code
as_screening_mat_id.MaterialGeneric Man page
as_screening_mat_id.MaterialIdentifierGeneric Man page
as_screening_mat_id.MaterialIdentifierScreening Man page Source code
as_screening_mat_id.MaterialScreening Man page
as_well_id Man page Source code
as_well_id.WellIdentifier Man page Source code
as_well_id.WellMetadata Man page Source code
assign_reference Source code
attribute_clause Man page Source code
c.json_class Man page Source code
c.json_vec Man page Source code
check_default_result Source code
check_file_result Source code
check_json_class Man page Source code
check_request_result Source code
create_default_handle Source code
create_file_handle Source code
create_request_handle Source code
dataset_code Man page Source code
dataset_code.DataSet Man page Source code
dataset_code.DataSetFileDTO Man page Source code
dataset_code.DatasetIdentifier Man page
dataset_code.DatasetReference Man page
dataset_code.FeatureVectorDatasetReference Man page
dataset_code.FeatureVectorDatasetWellReference Man page
dataset_code.ImageDatasetReference Man page
dataset_code.MicroscopyImageReference Man page
dataset_code.PlateImageReference Man page
do_requests_parallel Man page Source code
do_requests_serial Man page Source code
docs_link Man page Source code
ds_code_ds_id Source code
exp_id_str Man page Source code
exp_id_str.Experiment Man page Source code
exp_id_str.ExperimentIdentifier Man page Source code
extract_well_material Man page Source code
feat_ds_well_ref Man page Source code
fetch_ds Source code
fetch_ds_files Source code
fetch_ds_files.DataSetFileDTO Source code
fetch_ds_files.FileInfoDssDTO Source code
fetch_ds_files.NULL Source code
fetch_ds_files.character Source code
fetch_features Man page Source code
fetch_features.FeatureVectorDatasetReference Man page Source code
fetch_features.FeatureVectorDatasetWellReference Man page Source code
fetch_files Man page Source code
fetch_files.DataSet Man page
fetch_files.DataSetFileDTO Man page Source code
fetch_files.DatasetIdentifier Man page
fetch_files.DatasetReference Man page
fetch_files.FeatureVectorDatasetReference Man page
fetch_files.FeatureVectorDatasetWellReference Man page
fetch_files.FileInfoDssDTO Man page Source code
fetch_files.ImageDatasetReference Man page
fetch_files.MicroscopyImageReference Man page
fetch_files.NULL Man page Source code
fetch_files.PlateImageReference Man page
fetch_files.character Man page Source code
fetch_images Man page Source code
fetch_images.DatasetIdentifier Man page
fetch_images.DatasetReference Man page
fetch_images.ImageDatasetReference Man page
fetch_images.MicroscopyImageReference Man page Source code
fetch_images.PlateImageReference Man page Source code
fetch_img_for_ds Source code
fetch_img_meta Source code
get_field Man page Source code
get_field.json_class Man page Source code
get_field.json_vec Man page Source code
get_object_spec Source code
get_subclass Man page Source code
get_subclass.json_class Man page Source code
get_subclass.json_vec Man page Source code
get_subclass.list Man page Source code
has_common_subclass Man page Source code
has_fields Man page Source code
has_fields.default Man page Source code
has_fields.json_class Man page Source code
has_fields.json_vec Man page Source code
has_subclass Man page Source code
has_subclass.default Man page Source code
has_subclass.json_class Man page Source code
has_subclass.json_vec Man page Source code
infx Man page
infx-package Man page
is.json_class Man page
is.json_vec Man page
is_json_class Man page Source code
is_json_vec Man page Source code
is_token_valid Man page Source code
japply Source code
json_class Man page Source code
json_vec Man page Source code
list_dataset_files Source code
list_dataset_ids Man page Source code
list_dataset_ids.DataSet Man page Source code
list_dataset_ids.character Man page Source code
list_dataset_types Man page Source code
list_datasets Man page Source code
list_datasets.Experiment Man page Source code
list_datasets.Sample Man page Source code
list_datasets.character Man page Source code
list_datastore_urls Man page Source code
list_datastore_urls.DataSet Man page
list_datastore_urls.DatasetIdentifier Man page
list_datastore_urls.DatasetReference Man page
list_datastore_urls.FeatureVectorDatasetReference Man page
list_datastore_urls.FeatureVectorDatasetWellReference Man page
list_datastore_urls.ImageDatasetReference Man page
list_datastore_urls.MicroscopyImageReference Man page
list_datastore_urls.NULL Man page Source code
list_datastore_urls.PlateImageReference Man page
list_datastore_urls.character Man page Source code
list_datastores Man page Source code
list_dl_url Source code
list_download_urls Man page Source code
list_download_urls.DataSet Man page
list_download_urls.DataSetFileDTO Man page Source code
list_download_urls.DatasetIdentifier Man page
list_download_urls.DatasetReference Man page
list_download_urls.FeatureVectorDatasetReference Man page
list_download_urls.FeatureVectorDatasetWellReference Man page
list_download_urls.ImageDatasetReference Man page
list_download_urls.MicroscopyImageReference Man page
list_download_urls.PlateImageReference Man page
list_download_urls.character Man page Source code
list_ds_urls Source code
list_experiment_ids Man page Source code
list_experiment_types Man page Source code
list_experiments Man page Source code
list_experiments.ExperimentIdentifier Man page Source code
list_experiments.Project Man page Source code
list_feat_codes Source code
list_feats Source code
list_feature_codes Man page Source code
list_feature_codes.FeatureVectorDatasetReference Man page Source code
list_feature_codes.FeatureVectorDatasetWellReference Man page
list_features Man page Source code
list_features.FeatureVectorDatasetReference Man page Source code
list_features.FeatureVectorDatasetWellReference Man page
list_files Man page Source code
list_files.DataSet Man page
list_files.DataSetFileDTO Man page Source code
list_files.DatasetIdentifier Man page
list_files.DatasetReference Man page
list_files.FeatureVectorDatasetReference Man page
list_files.FeatureVectorDatasetWellReference Man page
list_files.ImageDatasetReference Man page
list_files.MicroscopyImageReference Man page
list_files.PlateImageReference Man page
list_files.character Man page Source code
list_image_metadata Man page Source code
list_image_metadata.DatasetIdentifier Man page
list_image_metadata.DatasetReference Man page
list_image_metadata.Experiment Man page Source code
list_image_metadata.ExperimentIdentifier Man page Source code
list_image_metadata.ImageDatasetReference Man page
list_image_metadata.MicroscopyImageReference Man page
list_image_metadata.PlateImageReference Man page
list_img_ds Source code
list_img_ref Man page Source code
list_img_ref.NULL Man page Source code
list_img_ref.WellPosition Man page Source code
list_img_ref_wrapper Source code
list_material Man page Source code
list_material.MaterialIdentifierGeneric Man page Source code
list_material.MaterialIdentifierScreening Man page Source code
list_material.Plate Man page
list_material.PlateIdentifier Man page
list_material.PlateMetadata Man page
list_material.Sample Man page Source code
list_material_types Man page Source code
list_plate_mat_map Source code
list_plate_meta Source code
list_plate_metadata Man page Source code
list_plate_metadata.Plate Man page
list_plate_metadata.PlateIdentifier Man page
list_plate_metadata.Sample Man page
list_plates Man page Source code
list_plates.Experiment Man page Source code
list_plates.ExperimentIdentifier Man page Source code
list_plates.NULL Man page Source code
list_projects Man page Source code
list_property_types Man page Source code
list_ref_for_material Source code
list_references Man page Source code
list_references.DataSet Man page Source code
list_references.DatasetIdentifier Man page
list_references.DatasetReference Man page
list_references.FeatureVectorDatasetReference Man page
list_references.FeatureVectorDatasetWellReference Man page
list_references.ImageDatasetReference Man page
list_references.MaterialGeneric Man page
list_references.MaterialIdentifierGeneric Man page
list_references.MaterialIdentifierScreening Man page
list_references.MaterialScreening Man page
list_references.MicroscopyImageReference Man page
list_references.Plate Man page
list_references.PlateIdentifier Man page
list_references.PlateImageReference Man page
list_references.PlateMetadata Man page
list_references.Sample Man page
list_sample_types Man page Source code
list_samples Man page Source code
list_samples.Experiment Man page
list_samples.ExperimentIdentifier Man page
list_samples.Plate Man page
list_samples.PlateIdentifier Man page
list_samples.PlateMetadata Man page
list_samples.WellIdentifier Man page
list_samples.WellMetadata Man page
list_samples_for_exp Source code
list_samples_for_plate Source code
list_samples_for_well Source code
list_wells Man page Source code
list_wells.MaterialGeneric Man page
list_wells.MaterialIdentifierGeneric Man page
list_wells.MaterialIdentifierScreening Man page
list_wells.MaterialScreening Man page
list_wells.Plate Man page
list_wells.PlateIdentifier Man page
list_wells.Sample Man page
list_wells_for_mat Source code
list_wells_for_plate Source code
login_openbis Man page Source code
logout_openbis Man page Source code
make_request Man page Source code
make_requests Man page Source code
match_clause Source code
material_id Man page Source code
new_json_class Source code
new_json_vec Source code
plate_id Man page Source code
print.json_class Man page Source code
print.json_vec Man page Source code
print_json_class Man page Source code
process_imgs Source code
process_json Man page Source code
property_clause Man page Source code
read_mat_files Man page Source code
remove_null Man page Source code
rep.json_class Man page Source code
rep.json_vec Man page Source code
resolve_fetch_opts Source code
resolve_references Man page Source code
rm_json_class Man page Source code
search_criteria Man page Source code
search_openbis Man page Source code
search_sub_criteria Man page Source code
set_attr Source code
style Man page Source code
time_attribute_clause Man page Source code
traverse_list Source code
unlist_objects Source code
well_id Man page Source code
well_pos Man page Source code
ropensci/infx documentation built on May 14, 2022, 5:51 p.m.

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