tv_summarise: Summarise data with respect to taxonomy

In ropensci/taxview: Tools for Vizualizing Data Taxonomically

Summarise data with respect to taxonomy

Description

Summarise data with respect to taxonomy

Usage

tv_summarise(x)

Arguments

x	(data.frame) input data

Value

an object of class tv_summary

Examples

## Not run: 
x <- system.file("examples/plant_spp.csv", package = "taxview")
dat <- tibble::as_tibble(
 data.table::fread(x, stringsAsFactors = FALSE, 
   data.table = FALSE))
out <- tv_prep_ids(x, ids = dat$id, db = "ncbi")
(res <- tv_summarise(out))
res$summary
res$by_rank
res$by_rank_name
res$by_within_rank

## End(Not run)

ropensci/taxview documentation built on Sept. 13, 2022, 8:41 p.m.