In ropenscilabs/phyrmeta: Client to Handle Phylometa Output

phyrmeta

knitr::opts_chunk$set(
  warning = FALSE,
  message = FALSE,
  collapse = TRUE,
  comment = "#>"
)

phyrmeta: Client to Handle Phylometa Output

Install

remotes::install_github("sckott/phyrmeta")

library('phyrmeta')

Parse Phylometa output files

1 group

Get an example file

file <- system.file("examples/example_one_group.txt", package = "phyrmeta")
cat(readLines(file)[1:10], sep = "\n")

Parse the file

phylometa_process(file, groups = 1)

N groups

And so on for N groups. Change the groups parameter to the number of groups in your output file.

Meta

• Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.
• Please report any issues or bugs
• License: MIT

ropenscilabs/phyrmeta documentation built on Dec. 1, 2020, 7:02 a.m.