permutation_test-function: Permutation Test For Proportions
In rpolicastro/scProportionTest: What the Package Does (One Line, Title Case)

permutation_test

R Documentation

Permutation Test For Proportions

Description

Permutation Test For Proportions

Usage

permutation_test(
  sc_utils_obj,
  cluster_identity = NA,
  sample_1 = NA,
  sample_2 = NA,
  sample_identity = "orig.ident",
  n_permutations = 1000
)

Arguments

`sc_utils_obj`	sc_utils object
`cluster_identity`	Column that has cluster names
`sample_1`	First sample to compare (ie. control)
`sample_2`	Sample to compare to first sample (ie. treatment)
`sample_identity`	Column that has sample names
`n_permutations`	Number of permutations