mat2strata: Define strata based on rows of a matrix
In rqtl/qtl2: Quantitative Trait Locus Mapping in Experimental Crosses
mat2strata R Documentation
Define strata based on rows of a matrix
Description
Use the rows of a matrix to define a set of strata for a stratified permutation test
Usage
mat2strata(mat)
Arguments
mat
A covariate matrix, as individuals x covariates
Value
A vector of character strings: for each row of mat,
we use base::paste() with collapse="|".
See Also
get_x_covar(), scan1perm()
Examples
iron <- read_cross2(system.file("extdata", "iron.zip", package="qtl2"))
Xcovar <- get_x_covar(iron)
perm_strata <- mat2strata(Xcovar)
rqtl/qtl2 documentation built on March 20, 2024, 6:35 p.m.
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| mat2strata | R Documentation |
Define strata based on rows of a matrix
Description
Use the rows of a matrix to define a set of strata for a stratified permutation test
Usage
mat2strata(mat)
Arguments
mat |
A covariate matrix, as individuals x covariates |
Value
A vector of character strings: for each row of mat,
we use base::paste() with collapse="|".
See Also
get_x_covar(), scan1perm()
Examples
iron <- read_cross2(system.file("extdata", "iron.zip", package="qtl2"))
Xcovar <- get_x_covar(iron)
perm_strata <- mat2strata(Xcovar)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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