sdp2char: Convert strain distribution patterns to character strings

In rqtl/qtl2: Quantitative Trait Locus Mapping in Experimental Crosses

Convert strain distribution patterns to character strings

Description

Convert a vector of numeric codes for strain distribution patterns to character strings.

Usage

sdp2char(sdp, n_strains = NULL, strains = NULL)

Arguments

sdp	Vector of strain distribution patterns (integers between 1 and 2^n-2 where n is the number of strains.
n_strains	Number of founder strains (if missing but strains is provided, we use the length of strains)
strains	Vector of single-letter codes for the strains

Value

Vector of character strings with the two groups of alleles separated by a vertical bar (|).

See Also

invert_sdp(), calc_sdp()

Examples

sdp <- c(m1=1, m2=12, m3=240)
sdp2char(sdp, 8)
sdp2char(sdp, strains=c("A", "B", "1", "D", "Z", "C", "P", "W"))

rqtl/qtl2 documentation built on March 20, 2024, 6:35 p.m.