Man pages for rscherrer/sagreicolor
| add_matrices | Matrix addition |
| add_spaces | Add spaces between words in labels |
| calc_expvar | Explained variance of a principal component |
| check_multinorm | Test multivariate normality across groups |
| check_normality | Test normality across groups |
| check_spatialcorr | Test spatial autocorrelation of the residuals |
| check_spatialcorr_nested | Test spatial autocorrelation of the residuals within islands |
| check_variances | Test homoscedasticity of the residuals across groups |
| cumulate_confusion_matrices | Cumulative confusion matrices |
| dewlap_anova | Multiple analyses of variance (ANOVA) |
| dewlap_biplot | Dewlap color space biplot |
| dewlap_dfa | Discriminant Function Analysis (DFA) of dewlap color |
| dewlap_dfa_global | Global Discriminant Function Analysis (DFA) of dewlap color |
| dewlap_gls | Fit and analyze generalized least squares models |
| dewlap_kruskal | Perform Kruskal Wallis test on each island |
| dewlap_manova | Multivariate analysis of variance (MANOVA) of dewlap color |
| dewlap_neural | Habitat classification with neural networks |
| dewlap_neural_nested | Habitat classification with neural networks per island |
| dewlap_permanova | Permutational multivariate analysis of variance (PERMANOVA)... |
| df2rspec | Convert to 'rspec' with transposition |
| do_boxplots | Boxplot of color metrics across islands and habitats |
| install_dependencies | Install dependencies of the package |
| linearize | Smooth reflectance artifacts |
| make_dataset | Make spectral dataset |
| matrix_contrasts | Matrix of contrast weights |
| plot_color_space | Plot color in PC space |
| plot_confusion_matrices | Plot neural network confusion matrices |
| plot_eigenvalues | PCA eigenvalues |
| plot_heatmap | Plot correlation between variables |
| plot_neural_importance | Plot importance of variables in discriminating between... |
| plot_neural_pvalues | Plot neural network classification |
| plot_neural_spectrum | Plot importance of wavelengths in discriminating between... |
| plot_neural_success | Plot neural network classification |
| plot_pc1_brightness | Plot PC1 against mean reflectance |
| plot_residuals | Plot residuals of dewlap color |
| process_spectra | Process reflectance spectra |
| save_svm_results | Save SVM output |
| show_locations | Show geographical coordinates |
| show_svm_params | Show SVM parameters |
| spectral_pca | Principal Component Analysis of dewlap reflectance |
| subset_habitats | Subset of the spectral dataset |
| test_contrasts | Test (multiple) univariate contrasts |
| test_multiContrasts | Test multivariate contrasts |
| write_output | Save output |
