plot_full_scan_from_root: Plot extended genome scan (from root folder)

In rscherrer/speciomer: Import Speciome Data into R

Plot extended genome scan (from root folder)

Description

Plots an extended genome scan with multiple layers at a series of time points, taking only the root folder of the simulation as input.

Usage

plot_full_scan_from_root(root, times, show_traits = TRUE, show_time = FALSE)

Arguments

root	Path to the simulation folder
times	The time points to plot
show_traits	Whether to show a histogram of ecological trait values too
show_time	Whether to show the time point on each plot

Details

Runs plot_full_scan in the background

Value

A list of ggplots (or a single ggplot if only one time point is specified)

See Also

plot_full_scan, read_loci, read_architecture

Examples

## Not run: 

root <- system.file("extdata", "sim-example", package = "speciomer")
plot_full_scan(root, times = -1000)


## End(Not run)

rscherrer/speciomer documentation built on March 11, 2023, 5:37 p.m.