ANCOM: Analysis of Composition of Microbiomes

In rusher321/rmeta: the function for my daily work

Analysis of Composition of Microbiomes

Description

Analysis of Composition of Microbiomes

Usage

ANCOM(
  feature_table,
  meta_data,
  struc_zero = NULL,
  main_var,
  p_adj_method = "BH",
  alpha = 0.05,
  adj_formula = NULL,
  rand_formula = NULL,
  paired,
  pid,
  count,
  ...
)

Arguments

feature_table	, object from the feature function
meta_data	, object from the feature function
struc_zero	, object from the feature function
main_var	, group to compare
p_adj_method	, defalut BH
alpha	,defalut 0.05
paired	, T/F
pid,	patient ID
...

rusher321/rmeta documentation built on April 1, 2022, 10:48 p.m.