Files in rxmenezes/SIM
Integrated Analysis on two human genomic datasets
DESCRIPTION
NAMESPACE
R/RESOURCERER.annotation.to.ID.R
R/assemble.data.R
R/getoverlappingregions.R
R/impute.nas.by.surrounding.R
R/integrated.analysis.R
R/link.metadata.R
R/run.ia.R
R/sim.plot.overlapping.indep.dep.features.R
R/sim.plot.pvals.on.genome.R
R/sim.plot.pvals.on.region.R
R/sim.plot.zscore.heatmap.R
R/sim.update.chrom.table.R
R/tabulate.pvals.R
R/tabulate.top.dep.features.R
R/tabulate.top.indep.features.R
R/zzz.R
data/acgh.data.rda
data/chrom.table.rda
data/expr.data.rda
data/samples.rda
inst/CITATION
man/RESOURCERER.annotation.to.ID.Rd
man/SIM-package.Rd
man/acgh.data.Rd
man/assemble.data.Rd
man/chrom.table.Rd
man/expr.data.Rd
man/getoverlappingregions.Rd
man/impute.nas.by.surrounding.Rd
man/integrated.analysis.Rd
man/link.metadata.Rd
man/samples.Rd
man/sim.plot.overlapping.indep.dep.features.Rd
man/sim.plot.pvals.on.genome.Rd
man/sim.plot.pvals.on.region.Rd
man/sim.plot.zoom.in.Rd
man/sim.plot.zscore.heatmap.Rd
man/sim.update.chrom.table.Rd
man/tabulate.pvals.Rd
man/tabulate.top.dep.features.Rd
man/tabulate.top.indep.features.Rd
src/withinWindow.c
vignettes/SIM.Rnw
vignettes/SIM.bib
vignettes/chr8q/data/abs.start.dep
vignettes/chr8q/data/abs.start.indep
vignettes/chr8q/data/ann.dep.data
vignettes/chr8q/data/ann.indep.data
vignettes/chr8q/data/dep.chr.data
vignettes/chr8q/data/dep.data
vignettes/chr8q/data/dep.data.only
vignettes/chr8q/data/dep.id.data
vignettes/chr8q/data/dep.pos.data
vignettes/chr8q/data/dep.symb.data
vignettes/chr8q/data/indep.chr.data
vignettes/chr8q/data/indep.data
vignettes/chr8q/data/indep.data.only
vignettes/chr8q/data/indep.id.data
vignettes/chr8q/data/indep.pos.data
vignettes/chr8q/data/indep.symb.data
vignettes/chr8q/heatmap_zscores/globaltest_heatmap_8_BY_pvals_smooth.pdf
vignettes/chr8q/intermediate.data/data.dep.pat.c.8
vignettes/chr8q/intermediate.data/data.indep.pat.c.8
vignettes/chr8q/intermediate.data/gpvals.pat.c.8
vignettes/chr8q/intermediate.data/my.zmat.8
vignettes/chr8q/intermediate.data/start.input.region.8
vignettes/chr8q/intermediate.data/zmat.8
vignettes/chr8q/intermediate.data/zmat.col.8
vignettes/chr8q/pvalue_plots/pvals_on_region.pdf
vignettes/chr8q/top.dep.features/top.dep.features.8.txt
vignettes/chr8q/top.indep.features/top.indep.features.8.txt
vignettes/chr8q/whole_genome_plot.pdf
