saeyslab/CytoNorm: Normalisation of cytometry data measured across multiple batches

This package can be used to normalize cytometry samples when a control sample is taken along in each of the batches. This is done by first identifying multiple clusters/cell types, learning the batch effects from the control samples and applying quantile normalization on all markers of interest.

Getting started

Package details

LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
saeyslab/CytoNorm documentation built on Oct. 11, 2019, 5:17 p.m.