Man pages for sagrudd/floundeR
Toolkit For Nanopore Sequence Analysis
| Angenieux | R6 Class for visualising floundeR based datasets |
| AngenieuxDecoration | R6 Class for describing additional Angenieux decorations |
| Blast | R6 Class for loading and analysing BLAST results in basic... |
| Fast5 | R6 Class for loading and analysing nanopore FAST5 sequence... |
| Fasta | R6 Class for loading and analysing FASTA files |
| Fastq | R6 Class for loading and analysing nanopore (and other) FASTQ... |
| flnDr | extract a floundeR packaged file |
| FloundeR | R6 Class for floundeR based analyses |
| Flowcell | R6 Class for performing Flowcell centric analyses |
| GenbankGenome | R6 Class for loading and analysing Genbank whole genome files |
| Infographic | R6 Class for loading and analysing sequence sets |
| InfographicItem | R6 Class for loading and analysing sequence sets |
| MultiplexSet | R6 Class for loading, visualising and analysing barcode... |
| phredmean | calculate mean Phred scores from list of Q values |
| qualToMeanQ | calculate mean Phred score from an ASCII encoded phred string |
| SequencingSet | R6 Class for loading and analysing sequence sets |
| SequencingSummary | R6 Class for loading and analysing nanopore... |
| TemporalSet | R6 Class for analysing sequence sets with accompanying... |
| to_flowcell | Prepare a 'flowcell' object from provided class |
| to_sequencing_set | Prepare a 'SequencingSet' object from provided class |
