knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)

[stephen@localhost rpmbuild]$ git config --global user.name "sagrudd" [stephen@localhost rpmbuild]$ git config --global user.email "stephen@mnemosyne.co.uk"

xurl <- "https://bioconductor.org/packages/release/bioc/html/ShortRead.html" xcontent <- httr::GET(xurl) xtables <- rvest::html_nodes(httr::content(xcontent, encoding="UTF-8"), "table")

library(packyak)

starting with a basic server version of fedora 33

sudo yum install R

enable password free sudo access

sudo visudo ALL=(ALL) NOPASSWD:ALL

sudo yum install rpm-build git rpm-devel rpmlint rpmdevtools sudo yum install libpng-devel bzip2-libs xz-devel libjpeg-devel openssl-devel icu

install.packages(c("cli", "stringr", "R6", "httr", "rvest", "lubridate", "git2r"))

packyak::PackYak$new(c("cli", "stringr", "R6", "httr", "rvest", "lubridate", "git2r", "knitr", "testthat", "rmarkdown"), build_rpm=TRUE)

packyak::PackYak$new(c("dplyr", "rlang", "purrr", "lubridate", "R6", "ggplot2", "RColorBrewer", "reshape2", "readr", "tidyr", "emojifont", "magrittr", "tibble", "aws.s3", "Rcpp", "Rsamtools", "cli", "stringr", "ShortRead"), build_rpm=TRUE)



sagrudd/packyak documentation built on Feb. 17, 2021, 7:38 a.m.